Platform: x86_64-apple-darwin15.6.0 (64-bit) The package has place the R version constraint. [1] RCurl1.98-1.1 SummarizedExperiment1.16.1 DelayedArray0.12.2 downloaded 377 KB, trying URL 'https://wbc.upm.edu.my/cran/bin/windows/contrib/3.6/xfun_0.16.zip' [4] colorspace_1.3-2 htmltools_0.3.5 base64enc_0.1-3 I would argue that the conclusion to, Yeah, just need to select one way of doing it and never use the other. Use MathJax to format equations. Press CTRL-C to abort.failedUnsatisfiableError: The following specifications were foundto be incompatible with the existing python installation in your environment:Specifications: It also hung on the solving environment for over an hour. I am running a new install of R (3.5.0) and RStudio (1.1.414). Now loading the DESeq2 library (Errors): Because I already installed >10 packages by hand I assume the solution is not to keep installing the missing packages because those packages will have more missing packages and more and more and I won't get out of this loop. [5] BiocManager1.30.10 GenomeInfoDbData1.2.2 cellranger1.1.0 pillar1.4.3 Error when installing Aldex2 - Community Plugin Support - Open Source Find centralized, trusted content and collaborate around the technologies you use most. library (olsrr) - Error - General - RStudio Community Post questions about Bioconductor Making statements based on opinion; back them up with references or personal experience. You are doing something very wrong when installing your packages. Policy. If not fixed, Try removing remove.packages (rlang) then. Replacing broken pins/legs on a DIP IC package. Retrying with flexible solve.Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.Collecting package metadata (repodata.json): doneSolving environment: failed with initial frozen solve. Thanks for contributing an answer to Stack Overflow! To subscribe to this RSS feed, copy and paste this URL into your RSS reader. If you dont post the error in question (why you cant install Hmisc) no one can help answer your question. The most common cause of this problem is trying to update a package while it is loaded in R (possibly in another process!). to one of the following locations: https://code.bioconductor.org/browse/DESeq2/, https://bioconductor.org/packages/DESeq2/, git clone https://git.bioconductor.org/packages/DESeq2, git clone [email protected]:packages/DESeq2. data . Error: package or namespace load failed for 'DESeq2' in loadNamespace (j <- i [ [1L]], c (lib.loc, .libPaths ()), versionCheck = vI [ [j]]): 'KEGGREST' 2301_76497647 17 1 109+ 20+ 30 10 1 0 2 0 Error: package or namespace load failed for 'olsrr' in loadNamespace (j <- i [ [1L]], c (lib.loc, .libPaths ()), versionCheck = vI [ [j]]): there is no package called 'zip' mara May 25, 2021, 12:49pm #2 It looks like you need a package that it depends on. [65] ape5.3 stringi1.4.6 Rcpp1.0.4 vctrs0.2.4 Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide, You can try installing packages in R (which comes with R 3.5.1, not RStudio). I do not get why Rstudio does not see that I alrerady installed DESeq2 with conda.
